Strain predictor

Host tropism predictor of influenza virus strains. The predictor utilizes combined protein sequence information from influenza proteins to predict host tropism of an influenza virus strain.

Tutorial Example

Please input protein sequence for prediction in the text box below. While sequences for all proteins are not compulsory, fewer input would result in a less accurate prediction.

Protein sequence must have a minimum length of 5 amino acids.

Only sequences containing 20 standard amino acids are allowed, in one-letter amino acid code as follows:
A C D E F G H I K L M N P Q R S T V W Y


Strain name


HA

M1

M2

NA

NP

NS1

NS2

PA

PB1

PB1-F2

PB2


Include predictions for individual protein tropism